ANMerge: A Comprehensive and Accessible Alzheimer's Disease Patient-Level Dataset.

Birkenbihl C., Westwood S., Shi L., Nevado-Holgado A., Westman E., Lovestone S., AddNeuroMed Consortium ., Hofmann-Apitius M.

BACKGROUND: Accessible datasets are of fundamental importance to the advancement of Alzheimer's disease (AD) research. The AddNeuroMed consortium conducted a longitudinal observational cohort study with the aim to discover AD biomarkers. During this study, a broad selection of data modalities was measured including clinical assessments, magnetic resonance imaging, genotyping, transcriptomic profiling, and blood plasma proteomics. Some of the collected data were shared with third-party researchers. However, this data was incomplete, erroneous, and lacking in interoperability. OBJECTIVE: To provide the research community with an accessible, multimodal, patient-level AD cohort dataset. METHODS: We systematically addressed several limitations of the originally shared resources and provided additional unreleased data to enhance the dataset. RESULTS: In this work, we publish and describe ANMerge, a new version of the AddNeuroMed dataset. ANMerge includes multimodal data from 1,702 study participants and is accessible to the research community via a centralized portal. CONCLUSION: ANMerge is an information rich patient-level data resource that can serve as a discovery and validation cohort for data-driven AD research, such as, for example, machine learning and artificial intelligence approaches.

DOI

10.3233/JAD-200948

Type

Journal article

Publication Date

2021-01-01T00:00:00+00:00

Volume

79

Pages

423 - 431

Total pages

8

Keywords

AddNeuroMed, Alzheimer’s disease, biomarkers, cohort analysis, cohort studies, data-driven science, dataset, dementia, genome wide association studies, magnetic resonance imaging, multimodal, Aged, Aged, 80 and over, Alzheimer Disease, Cohort Studies, Datasets as Topic, Female, Gene Expression Profiling, Genotype, Humans, Magnetic Resonance Imaging, Male, Proteomics

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